Single-cell RNA-seq of the Developing Cardiac Outflow Tract

  • 3 Stages
  • 6 Celltypes
  • 17 Clusters
  • 55,611 Cells

Cardiac outflow tract (OFT) is a major hotspot for congenital heart diseases (CHDs). Approximately 30% of CHDs involve abnormalities in OFT development, which constitute a large class of CHDs, namely OFT malformations. A thorough understanding of the cellular diversity, transitions and regulatory networks of normal OFT development is essential to decipher the etiology of OFT malformations.

We preformed single-cell transcriptomic sequencing of 55,611 mouse OFT cells from three successive developmental stages... »»» more

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Gene Expression

Interactive examination of the expression intensity distribution for any gene of interest.

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Dynamic Change of Cell States

Interactive visualization of the dynamic change of cell states for each cell cluster in a 3D tSNE space and a force-directed layout of the KNN graph.

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Intercellular Communication

Interactive network view of potential intercellular communications among cell lineages for any ligand-receptor pair.

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